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Research Group „Integrative ImmunoResearch Lab”

Prof. Dr. Michele Proietti

The AG Proietti is dedicated to understanding why some immune systems struggle to control inflammation or combat infections. By combining experimental and computational approaches, it aims to uncover the underlying mechanisms of immune dysfunction and advance fundamental knowledge in immunology.

Computational work

Here, we focus on genetic and genomic data analysis and the development of tools, databases, and applications for research data management and analysis. Our work aims to improve the genetic diagnosis in patients with suspected inborn errors. 

We have several expertise that allow us to perform a wide range of bioinformatics tasks, from raw data processing to advanced analysis and visualization, while also developing custom software tools and databases to support their research.

Over the years, we have developed:

The GemmaDB: A system to analyze, store, and integrate clinical, genetic, lab, and other omics datasets for internal use at the CCI in Freiburg.

The GeniaDB: A unique place to centralize and harmonize knowledge on all genetically driven immune-related disorders and to catalog any patient and variant ever published in the literature (www.geniadb.net).

The SHaReD platform: A system to store and integrate multi-omics datasets generated for diverse cohorts included in the research projects of the RESIST consortium at the Hanover Medical School (www.resist-cluster.de).

Experimental work

Here, we investigate how how genetic factors and sensing of nucleotides or nucleic acids regulate the human immune response. Recently, we have discovered a new and unexplored pathway related to nucleic acid sensing and immune response. We have found that ADA2 is a lysosomal protein that binds DNA and efficiently deaminates deoxyadenosine (dA) residues of DNA to deoxyinosine (dI), suggesting that DNA is its natural substrate. We also found that dA-to-dI editing of DNA and ADA2 facilitates immune detection of DNA mediated by Toll-like receptor 9 (TLR9). By elucidating ADA2’s role in DNA sensing and metabolism, this study expands our understanding of innate immunity and sheds light on potential therapeutic targets for autoimmune and autoinflammatory diseases. This finding opens up new avenues for understanding immune diseases and potentially developing novel therapeutic approaches (https://www.cell.com/cell-reports/fulltext/S2211-1247(24)01250-6).

Lysosomal deoxyadenosine Deaminase Acting on DNA (LADAD): Our study revealed that ADA2 localizes within the lysosomes, where it interacts with DNA molecules, altering their sequences by converting deoxyadenosine (dA) to deoxyinosine (dI). This activity is crucial in regulating lysosomal immune sensing of nucleic acids (NAs). These results describe a may impact treatment and management of ADA2 deficiency (DADA2) as well as other diseases like autoimmune diseases, cancer, or infectious diseases.

CV

Current position

  • Professor (W1), Genetic of Immune Dysregulation, MHH Hannover Medical School
  • Head of the Genetic and Genomic Research Unit, Institute for Immunodeficiency (IFI), Medical Center and Faculty of Medicine, University of Freiburg
  • Group leader Institute for Immunodeficiency (IFI), Medical Center and Faculty of Medicine, University of Freiburg and Department of Rheumatology and Clinical Immunology, MHH Hannover

Professional career

Since 2020Professor (W1), Genetic of Immunedysregulation, MHH Hannover, Germany
Since 2017Head of the Genetic and Genomic Research Unit, Institute for Immunodeficiency (IFI), Faculty of Medicine, University of Freiburg.
Research focus: the unit acts as a link between clinical and experimental immunologists with the aim of transferring genetic findings into clinic.
Since 2017Group leader: Institute for Immunodeficiency (IFI), Faculty of Medicine, University of Freiburg.
Research focus: genetic and immune-dysregulation.
2015-2017Scientist, CCI, Uniklinik Freiburg, Freiburg im Breisgau (Germany).
Research focus: genetic and immune-dysregulation.
2010-2015Postdoc, Institute of Research in Biomedicine (IRB), Bellinzona, Switzerland.
Research focus: purinergic signaling and immune response.
2007-2010Clinician, Department of Internal Medicine, University of Genova, Italy.
PhD in clinical and experimental Immunology, Centre of Excellence for Biomedical Research (CEBR), University of Genova, Italy.
Clinical activity: diagnosis, treatment and care of individuals with autoimmune diseases (e.g. systemic sclerosis, systemic lupus erythematosus, vasculitis, rheumatoid arthritis) and primary immunodeficiencies.
Research activity: purinergic signaling and immune response.
2001-2006Residency in Internal Medicine, department of internal medicine and clinical immunology unit, University of Rome “La Sapienza”.
Clinical training: diagnosis, treatment, and care of patients with complex and multisystem disorders, with particular focus on autoimmune diseases.
Research activity: endothelial dysfunction in systemic sclerosis.

Academic qualifications

  • 2010: PhD Clinical and Experimental Immunology, University of Genova, Italy
  • 2006: Board Certification in internal Medicine, University of Rome “La Sapienza”
  • 2001: Medical degree, University of Rome “La Sapienza”

University training and degree

  • 1996-2001: Medical studies, University of Rome “La Sapienza”
  • 1999-2001: Clinical Immunology and Allergology Unit, University of Rome “La Sapienza”

Collaborations

National Collaborations:

  • Bodo Grimbacher, Center for Chronic Immunodeficiency (CCI)
  • Torsten Witte, MHH Hannover, Klinik für Rheumatologie und Immunologie
  • Doris Steinemann, MHH Hannover, Institut für Humangenetik
  • Nataliya DiDonato, MHH Hannover, Institut für Humangenetik
  • Philipp Henneke, UNIVERSITY MEDICAL CENTER and FACULTY OF MEDICINE FREIBURG, Institute for Infection Prevention and Control & Institute for Immunodeficiency
  • Stephan Rossart, Uniklinikum Erlangen
  • Eva Bartok, UNI Bonn

International Collaborations:

  • Ingrun Alseth, Oslo University Hospital
  • Ole K Greiner Tollersrud, UiT The Arctic University of Norway.
  • Max Warncke, Novartis Institute for Biomedical Research
  • Elisabetta Traggiai, Novartis Institute for Biomedical Research

Funding

  • CRC/TRR 359 Perinatal Development of Immune Cell Topology (PILOT)
  • Cluster of Excellence RESIST (EXC 2155)
  • Flex Funding, Cluster of Excellence RESIST

Team

Group Leader  
Michele Proiettimichele.proietti@uniklinik-freiburg.de 270-77561
Post-Docs  
Andrés Caballeroandres.caballero@uniklinik-freiburg.de270-77729
PhD Students  
Andreas Goschinandreas.goschin@uniklinik-freiburg.de  
MD Students  
David Fuchs  
Natalia Hammersmith  
Contact

Prof. Dr. Michele Proietti

+49 (0)761 270-77561

michele.proietti@uniklinik-freiburg.de

Medical Center - University of Freiburg

Center for Chronic Immunodeficiency
at Center for Translational Cell Research

Breisacher Str. 115
79106 Freiburg
Germany